Designer algorithms for cryptogene searches
نویسنده
چکیده
RNA editing in the mitochondria of kinetoplastid protozoa describes the insertion and (or) deletion of precise numbers of uridines at precise locations in the transcribed RNA. Such genes are known as cryptogenes. We describe dynamic programming algorithms to search for unknown cryptogenes and for the sequences that template the editing, gRNAs. Results of applying the cryptogenegRNA algorithm to known cryptogene sequences from Leishmania rarenrolae are presented.
منابع مشابه
Computer methods for locating kinetoplastid cryptogenes.
RNA editing in the mitochondria of kinetoplastid protoza involves the insertion and/or deletion of precise numbers of uridine residues at precise locations in the numbers of uridine residues at precise locations in the transcribed RNA of certain genes. These genes are known as cryptogenes. In this paper we study computational algorithms to search for unknown cryptogenes and for the associated t...
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تاریخ انتشار 2003